| RVdb StrainID | ANM00385 | GenBank Accession | OK539478.1 |
| Species | RVA | Sequence Length | 7135 nt |
| Serotype | 22 Checked by RVdb | Serotype (GenBank) | 22 |
| Definition | Rhinovirus A22 strain RvA22/USA/2021/CCSRHY, complete genome | GenBank Submission Date | 2022-01-13 |
| Strain Name | RvA22/USA/2021/CCSRHY | Sampling Date | 2021 |
| Sampling Country | USA | Sampling location | Seattle, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 185896 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA008986 | 1A (VP4) | 612 | 818 | 0 | 0 | 207 | |
| SQA008987 | 1B (VP2) | 819 | 1610 | 0 | 0 | 792 | |
| SQA008988 | 1C (VP3) | 1611 | 2321 | 0 | 0 | 711 | |
| SQA008989 | 1D (VP1) | 2322 | 3188 | 0 | 0 | 867 | |
| SQA008990 | 2A (P2-A) | 3189 | 3614 | 0 | 0 | 426 | |
| SQA008991 | 2B (P2-B) | 3615 | 3899 | 0 | 0 | 285 | |
| SQA008992 | 2C (P2-C) | 3900 | 4865 | 0 | 0 | 966 | |
| SQA008993 | 3'UTR | 7092 | 7135 | 0 | 0 | 44 | |
| SQA008994 | 3A (P3-A) | 4866 | 5096 | 0 | 0 | 231 | |
| SQA008995 | 3B (VPg) | 5097 | 5159 | 0 | 0 | 63 | |
| SQA008996 | protease 3C | 5160 | 5708 | 0 | 0 | 549 | |
| SQA008997 | 3D | 5709 | 7088 | 0 | 0 | 1380 | |
| SQA008998 | 5'UTR | 1 | 611 | 0 | 0 | 611 | |
| SQA008999 | CDS | 612 | 7091 | 0 | 0 | 6480 | |
| SQA009000 | VP4/2 | 612 | 1046 | 0 | 0 | 435 | |
| SQA009001 | genome | 1 | 7135 | 0 | 0 | 7135 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA024481 | protease 3C | 1517 | 1699 | 0 | 0 | 183 | |
| SPA024482 | 3D | 1700 | 2159 | 0 | 0 | 460 | |
| SPA024483 | 3B (VPg) | 1496 | 1516 | 0 | 0 | 21 | |
| SPA024484 | 3A (P3-A) | 1419 | 1495 | 0 | 0 | 77 | |
| SPA024485 | 2C (P2-C) | 1097 | 1418 | 0 | 0 | 322 | |
| SPA024486 | 2B (P2-B) | 1002 | 1096 | 0 | 0 | 95 | |
| SPA024487 | 2A (P2-A) | 860 | 1001 | 0 | 0 | 142 | |
| SPA024488 | 1D (VP1) | 571 | 859 | 0 | 0 | 289 | |
| SPA024489 | 1C (VP3) | 334 | 570 | 0 | 0 | 237 | |
| SPA024490 | 1B (VP2) | 70 | 333 | 0 | 0 | 264 | |
| SPA024491 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA024492 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA024493 | CDS | 1 | 2159 | 0 | 0 | 2159 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |