| RVdb StrainID | ANM00370 | GenBank Accession | OK539494.1 |
| Species | RVA | Sequence Length | 7089 nt |
| Serotype | 67 Checked by RVdb | Serotype (GenBank) | 67 |
| Definition | Rhinovirus A67 strain RvA67/USA/2021/JXLCTN, complete genome | GenBank Submission Date | 2022-01-13 |
| Strain Name | RvA67/USA/2021/JXLCTN | Sampling Date | 2021 |
| Sampling Country | USA | Sampling location | Seattle, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 185924 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA008938 | 1A (VP4) | 565 | 771 | 0 | 0 | 207 | |
| SQA008939 | 1B (VP2) | 772 | 1557 | 0 | 0 | 786 | |
| SQA008940 | 1C (VP3) | 1558 | 2271 | 0 | 0 | 714 | |
| SQA008941 | 1D (VP1) | 2272 | 3138 | 0 | 0 | 867 | |
| SQA008942 | 2A (P2-A) | 3139 | 3564 | 0 | 0 | 426 | |
| SQA008943 | 2B (P2-B) | 3565 | 3849 | 0 | 0 | 285 | |
| SQA008944 | 2C (P2-C) | 3850 | 4815 | 0 | 0 | 966 | |
| SQA008945 | 3'UTR | 7042 | 7088 | 0 | 0 | 47 | |
| SQA008946 | 3A (P3-A) | 4816 | 5046 | 0 | 0 | 231 | |
| SQA008947 | 3B (VPg) | 5047 | 5109 | 0 | 0 | 63 | |
| SQA008948 | protease 3C | 5110 | 5658 | 0 | 0 | 549 | |
| SQA008949 | 3D | 5659 | 7038 | 0 | 0 | 1380 | |
| SQA008950 | 5'UTR | 1 | 564 | 1 | 0 | 564 | |
| SQA008951 | CDS | 565 | 7041 | 0 | 0 | 6477 | |
| SQA008952 | VP4/2 | 565 | 999 | 0 | 0 | 435 | |
| SQA008953 | genome | 1 | 7089 | 1 | 0 | 7089 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA024676 | protease 3C | 1516 | 1698 | 0 | 0 | 183 | |
| SPA024677 | 3D | 1699 | 2158 | 0 | 0 | 460 | |
| SPA024678 | 3B (VPg) | 1495 | 1515 | 0 | 0 | 21 | |
| SPA024679 | 3A (P3-A) | 1418 | 1494 | 0 | 0 | 77 | |
| SPA024680 | 2C (P2-C) | 1096 | 1417 | 0 | 0 | 322 | |
| SPA024681 | 2B (P2-B) | 1001 | 1095 | 0 | 0 | 95 | |
| SPA024682 | 2A (P2-A) | 859 | 1000 | 0 | 0 | 142 | |
| SPA024683 | 1D (VP1) | 570 | 858 | 0 | 0 | 289 | |
| SPA024684 | 1C (VP3) | 332 | 569 | 0 | 0 | 238 | |
| SPA024685 | 1B (VP2) | 70 | 331 | 0 | 0 | 262 | |
| SPA024686 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA024687 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA024688 | CDS | 1 | 2158 | 0 | 0 | 2158 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |