| RVdb StrainID | ANM00350 | GenBank Accession | OK649361.1 |
| Species | RVA | Sequence Length | 7123 nt |
| Serotype | 29 Checked by RVdb | Serotype (GenBank) | 29 |
| Definition | Rhinovirus A29 strain RvA29/USA/2021/2T2QXW, complete genome | GenBank Submission Date | 2022-06-08 |
| Strain Name | RvA29/USA/2021/2T2QXW | Sampling Date | 2021 |
| Sampling Country | USA | Sampling location | Seattle, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 44129 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA008874 | 1A (VP4) | 613 | 819 | 0 | 0 | 207 | |
| SQA008875 | 1B (VP2) | 820 | 1617 | 0 | 0 | 798 | |
| SQA008876 | 1C (VP3) | 1618 | 2331 | 0 | 0 | 714 | |
| SQA008877 | 1D (VP1) | 2332 | 3180 | 0 | 0 | 849 | |
| SQA008878 | 2A (P2-A) | 3181 | 3600 | 0 | 0 | 420 | |
| SQA008879 | 2B (P2-B) | 3601 | 3885 | 0 | 0 | 285 | |
| SQA008880 | 2C (P2-C) | 3886 | 4851 | 0 | 0 | 966 | |
| SQA008881 | 3'UTR | 7078 | 7123 | 0 | 0 | 46 | |
| SQA008882 | 3A (P3-A) | 4852 | 5082 | 0 | 0 | 231 | |
| SQA008883 | 3B (VPg) | 5083 | 5145 | 0 | 0 | 63 | |
| SQA008884 | protease 3C | 5146 | 5694 | 0 | 0 | 549 | |
| SQA008885 | 3D | 5695 | 7074 | 0 | 0 | 1380 | |
| SQA008886 | 5'UTR | 1 | 612 | 0 | 0 | 612 | |
| SQA008887 | CDS | 613 | 7077 | 0 | 0 | 6465 | |
| SQA008888 | VP4/2 | 613 | 1047 | 0 | 0 | 435 | |
| SQA008889 | genome | 1 | 7123 | 0 | 0 | 7123 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA024936 | protease 3C | 1512 | 1694 | 0 | 0 | 183 | |
| SPA024937 | 3D | 1695 | 2150 | 0 | 0 | 456 | |
| SPA024938 | 3B (VPg) | 1491 | 1511 | 0 | 0 | 21 | |
| SPA024939 | 3A (P3-A) | 1414 | 1490 | 0 | 0 | 77 | |
| SPA024940 | 2C (P2-C) | 1092 | 1413 | 0 | 0 | 322 | |
| SPA024941 | 2B (P2-B) | 997 | 1091 | 0 | 0 | 95 | |
| SPA024942 | 2A (P2-A) | 855 | 996 | 0 | 0 | 142 | |
| SPA024943 | 1D (VP1) | 574 | 854 | 0 | 0 | 281 | |
| SPA024944 | 1C (VP3) | 334 | 573 | 0 | 0 | 240 | |
| SPA024945 | 1B (VP2) | 70 | 333 | 0 | 0 | 264 | |
| SPA024946 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA024947 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA024948 | CDS | 1 | 2154 | 0 | 0 | 2154 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |