| RVdb StrainID | ANM00335 | GenBank Accession | OK649378.1 |
| Species | RVA | Sequence Length | 7009 nt |
| Serotype | 66 Checked by RVdb | Serotype (GenBank) | 66 |
| Definition | Rhinovirus A66 strain RvA66/USA/2021/94WHA6, complete genome | GenBank Submission Date | 2022-01-13 |
| Strain Name | RvA66/USA/2021/94WHA6 | Sampling Date | 2021 |
| Sampling Country | USA | Sampling location | Seattle, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 185923 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA008826 | 1A (VP4) | 518 | 724 | 0 | 0 | 207 | |
| SQA008827 | 1B (VP2) | 725 | 1513 | 0 | 0 | 789 | |
| SQA008828 | 1C (VP3) | 1514 | 2227 | 0 | 0 | 714 | |
| SQA008829 | 1D (VP1) | 2228 | 3091 | 0 | 0 | 864 | |
| SQA008830 | 2A (P2-A) | 3092 | 3517 | 0 | 0 | 426 | |
| SQA008831 | 2B (P2-B) | 3518 | 3802 | 0 | 0 | 285 | |
| SQA008832 | 2C (P2-C) | 3803 | 4768 | 0 | 0 | 966 | |
| SQA008833 | 3'UTR | 6995 | 7009 | 0 | 1 | 15 | |
| SQA008834 | 3A (P3-A) | 4769 | 4999 | 0 | 0 | 231 | |
| SQA008835 | 3B (VPg) | 5000 | 5062 | 0 | 0 | 63 | |
| SQA008836 | protease 3C | 5063 | 5611 | 0 | 0 | 549 | |
| SQA008837 | 3D | 5612 | 6991 | 0 | 0 | 1380 | |
| SQA008838 | 5'UTR | 1 | 517 | 1 | 0 | 517 | |
| SQA008839 | CDS | 518 | 6994 | 0 | 0 | 6477 | |
| SQA008840 | VP4/2 | 518 | 952 | 0 | 0 | 435 | |
| SQA008841 | genome | 1 | 7009 | 1 | 1 | 7009 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA025131 | protease 3C | 1516 | 1698 | 0 | 0 | 183 | |
| SPA025132 | 3D | 1699 | 2146 | 0 | 0 | 448 | |
| SPA025133 | 3B (VPg) | 1495 | 1515 | 0 | 0 | 21 | |
| SPA025134 | 3A (P3-A) | 1418 | 1494 | 0 | 0 | 77 | |
| SPA025135 | 2C (P2-C) | 1096 | 1417 | 0 | 0 | 322 | |
| SPA025136 | 2B (P2-B) | 1001 | 1095 | 0 | 0 | 95 | |
| SPA025137 | 2A (P2-A) | 859 | 1000 | 0 | 0 | 142 | |
| SPA025138 | 1D (VP1) | 571 | 858 | 0 | 0 | 288 | |
| SPA025139 | 1C (VP3) | 331 | 570 | 0 | 0 | 240 | |
| SPA025140 | 1B (VP2) | 70 | 330 | 0 | 0 | 261 | |
| SPA025141 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA025142 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA025143 | CDS | 1 | 2158 | 0 | 0 | 2158 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |