| RVdb StrainID | ANM00260 | GenBank Accession | OL638406.1 |
| Species | RVA | Sequence Length | 7063 nt |
| Serotype | 21 Checked by RVdb | Serotype (GenBank) | 21 |
| Definition | Rhinovirus A21 strain RvA21/USA/2021/4BVZBR, complete genome | GenBank Submission Date | 2022-06-08 |
| Strain Name | RvA21/USA/2021/4BVZBR | Sampling Date | 2021 |
| Sampling Country | USA | Sampling location | Seattle, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 44128 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA008586 | 1A (VP4) | 564 | 770 | 0 | 0 | 207 | |
| SQA008587 | 1B (VP2) | 771 | 1550 | 0 | 0 | 780 | |
| SQA008588 | 1C (VP3) | 1551 | 2273 | 0 | 0 | 723 | |
| SQA008589 | 1D (VP1) | 2274 | 3134 | 0 | 0 | 861 | |
| SQA008590 | 2A (P2-A) | 3135 | 3560 | 0 | 0 | 426 | |
| SQA008591 | 2B (P2-B) | 3561 | 3845 | 0 | 0 | 285 | |
| SQA008592 | 2C (P2-C) | 3846 | 4811 | 0 | 0 | 966 | |
| SQA008593 | 3'UTR | 7038 | 7063 | 0 | 1 | 26 | |
| SQA008594 | 3A (P3-A) | 4812 | 5042 | 0 | 0 | 231 | |
| SQA008595 | 3B (VPg) | 5043 | 5105 | 0 | 0 | 63 | |
| SQA008596 | protease 3C | 5106 | 5654 | 0 | 0 | 549 | |
| SQA008597 | 3D | 5655 | 7034 | 0 | 0 | 1380 | |
| SQA008598 | 5'UTR | 1 | 563 | 1 | 0 | 563 | |
| SQA008599 | CDS | 564 | 7037 | 0 | 0 | 6474 | |
| SQA008600 | VP4/2 | 564 | 998 | 0 | 0 | 435 | |
| SQA008601 | genome | 1 | 7063 | 1 | 1 | 7063 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA025625 | protease 3C | 1515 | 1697 | 0 | 0 | 183 | |
| SPA025626 | 3D | 1698 | 2153 | 0 | 0 | 456 | |
| SPA025627 | 3B (VPg) | 1494 | 1514 | 0 | 0 | 21 | |
| SPA025628 | 3A (P3-A) | 1417 | 1493 | 0 | 0 | 77 | |
| SPA025629 | 2C (P2-C) | 1095 | 1416 | 0 | 0 | 322 | |
| SPA025630 | 2B (P2-B) | 1000 | 1094 | 0 | 0 | 95 | |
| SPA025631 | 2A (P2-A) | 858 | 999 | 0 | 0 | 142 | |
| SPA025632 | 1D (VP1) | 571 | 857 | 0 | 0 | 287 | |
| SPA025633 | 1C (VP3) | 330 | 570 | 0 | 0 | 241 | |
| SPA025634 | 1B (VP2) | 70 | 329 | 0 | 0 | 260 | |
| SPA025635 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA025636 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA025637 | CDS | 1 | 2157 | 0 | 0 | 2157 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |