| RVdb StrainID | ANM00245 | GenBank Accession | OL638425.1 |
| Species | RVA | Sequence Length | 7017 nt |
| Serotype | 59 Checked by RVdb | Serotype (GenBank) | 59 |
| Definition | Rhinovirus A59 strain RvA59/USA/2021/C69TDF, complete genome | GenBank Submission Date | 2022-06-08 |
| Strain Name | RvA59/USA/2021/C69TDF | Sampling Date | 2021 |
| Sampling Country | USA | Sampling location | Seattle, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 185918 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA008538 | 1A (VP4) | 514 | 720 | 0 | 0 | 207 | |
| SQA008539 | 1B (VP2) | 721 | 1515 | 0 | 0 | 795 | |
| SQA008540 | 1C (VP3) | 1516 | 2229 | 0 | 0 | 714 | |
| SQA008541 | 1D (VP1) | 2230 | 3087 | 0 | 0 | 858 | |
| SQA008542 | 2A (P2-A) | 3088 | 3513 | 0 | 0 | 426 | |
| SQA008543 | 2B (P2-B) | 3514 | 3798 | 0 | 0 | 285 | |
| SQA008544 | 2C (P2-C) | 3799 | 4764 | 0 | 0 | 966 | |
| SQA008545 | 3'UTR | 6991 | 7017 | 0 | 1 | 27 | |
| SQA008546 | 3A (P3-A) | 4765 | 4995 | 0 | 0 | 231 | |
| SQA008547 | 3B (VPg) | 4996 | 5058 | 0 | 0 | 63 | |
| SQA008548 | protease 3C | 5059 | 5607 | 0 | 0 | 549 | |
| SQA008549 | 3D | 5608 | 6987 | 0 | 0 | 1380 | |
| SQA008550 | 5'UTR | 1 | 513 | 1 | 0 | 513 | |
| SQA008551 | CDS | 514 | 6990 | 0 | 0 | 6477 | |
| SQA008552 | VP4/2 | 514 | 948 | 0 | 0 | 435 | |
| SQA008553 | genome | 1 | 7017 | 1 | 1 | 7017 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA025820 | protease 3C | 1516 | 1698 | 0 | 0 | 183 | |
| SPA025821 | 3D | 1699 | 2154 | 0 | 0 | 456 | |
| SPA025822 | 3B (VPg) | 1495 | 1515 | 0 | 0 | 21 | |
| SPA025823 | 3A (P3-A) | 1418 | 1494 | 0 | 0 | 77 | |
| SPA025824 | 2C (P2-C) | 1096 | 1417 | 0 | 0 | 322 | |
| SPA025825 | 2B (P2-B) | 1001 | 1095 | 0 | 0 | 95 | |
| SPA025826 | 2A (P2-A) | 859 | 1000 | 0 | 0 | 142 | |
| SPA025827 | 1D (VP1) | 573 | 858 | 0 | 0 | 286 | |
| SPA025828 | 1C (VP3) | 335 | 572 | 0 | 0 | 238 | |
| SPA025829 | 1B (VP2) | 70 | 334 | 0 | 0 | 265 | |
| SPA025830 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA025831 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA025832 | CDS | 1 | 2158 | 0 | 0 | 2158 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |