| RVdb StrainID | ANM00205 | GenBank Accession | OL961530.1 |
| Species | RVA | Sequence Length | 7133 nt |
| Serotype | 54 Checked by RVdb | Serotype (GenBank) | 54 |
| Definition | Rhinovirus A54 strain RvA54/USA/2021/K6S7UL, complete genome | GenBank Submission Date | 2022-05-10 |
| Strain Name | RvA54/USA/2021/K6S7UL | Sampling Date | 2021 |
| Sampling Country | USA | Sampling location | Seattle, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 185914 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA008410 | 1A (VP4) | 611 | 817 | 0 | 0 | 207 | |
| SQA008411 | 1B (VP2) | 818 | 1612 | 0 | 0 | 795 | |
| SQA008412 | 1C (VP3) | 1613 | 2326 | 0 | 0 | 714 | |
| SQA008413 | 1D (VP1) | 2327 | 3184 | 0 | 0 | 858 | |
| SQA008414 | 2A (P2-A) | 3185 | 3610 | 0 | 0 | 426 | |
| SQA008415 | 2B (P2-B) | 3611 | 3895 | 0 | 0 | 285 | |
| SQA008416 | 2C (P2-C) | 3896 | 4861 | 0 | 0 | 966 | |
| SQA008417 | 3'UTR | 7088 | 7133 | 0 | 1 | 46 | |
| SQA008418 | 3A (P3-A) | 4862 | 5092 | 0 | 0 | 231 | |
| SQA008419 | 3B (VPg) | 5093 | 5155 | 0 | 0 | 63 | |
| SQA008420 | protease 3C | 5156 | 5704 | 0 | 0 | 549 | |
| SQA008421 | 3D | 5705 | 7084 | 0 | 0 | 1380 | |
| SQA008422 | 5'UTR | 1 | 610 | 0 | 0 | 610 | |
| SQA008423 | CDS | 611 | 7087 | 0 | 0 | 6477 | |
| SQA008424 | VP4/2 | 611 | 1045 | 0 | 0 | 435 | |
| SQA008425 | genome | 1 | 7133 | 0 | 1 | 7133 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA027627 | protease 3C | 1516 | 1698 | 0 | 0 | 183 | |
| SPA027628 | 3D | 1699 | 2158 | 0 | 0 | 460 | |
| SPA027629 | 3B (VPg) | 1495 | 1515 | 0 | 0 | 21 | |
| SPA027630 | 3A (P3-A) | 1418 | 1494 | 0 | 0 | 77 | |
| SPA027631 | 2C (P2-C) | 1096 | 1417 | 0 | 0 | 322 | |
| SPA027632 | 2B (P2-B) | 1001 | 1095 | 0 | 0 | 95 | |
| SPA027633 | 2A (P2-A) | 859 | 1000 | 0 | 0 | 142 | |
| SPA027634 | 1D (VP1) | 573 | 858 | 0 | 0 | 286 | |
| SPA027635 | 1C (VP3) | 335 | 572 | 0 | 0 | 238 | |
| SPA027636 | 1B (VP2) | 70 | 334 | 0 | 0 | 265 | |
| SPA027637 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA027638 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA027639 | CDS | 1 | 2158 | 0 | 0 | 2158 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |