| RVdb StrainID | ANM00110 | GenBank Accession | OM001448.1 |
| Species | RVA | Sequence Length | 7062 nt |
| Serotype | 47 Checked by RVdb | Serotype (GenBank) | 47 |
| Definition | Rhinovirus A47 strain RvA47/USA/2021/T4J636, complete genome | GenBank Submission Date | 2022-01-13 |
| Strain Name | RvA47/USA/2021/T4J636 | Sampling Date | 2021 |
| Sampling Country | USA | Sampling location | Seattle, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 185911 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA008109 | 1A (VP4) | 574 | 780 | 0 | 0 | 207 | |
| SQA008110 | 1B (VP2) | 781 | 1575 | 0 | 0 | 795 | |
| SQA008111 | 1C (VP3) | 1576 | 2289 | 0 | 0 | 714 | |
| SQA008112 | 1D (VP1) | 2290 | 3147 | 0 | 0 | 858 | |
| SQA008113 | 2A (P2-A) | 3148 | 3573 | 0 | 0 | 426 | |
| SQA008114 | 2B (P2-B) | 3574 | 3858 | 0 | 0 | 285 | |
| SQA008115 | 2C (P2-C) | 3859 | 4824 | 0 | 0 | 966 | |
| SQA008116 | 3A (P3-A) | 4825 | 5055 | 0 | 0 | 231 | |
| SQA008117 | 3B (VPg) | 5056 | 5118 | 0 | 0 | 63 | |
| SQA008118 | protease 3C | 5119 | 5667 | 0 | 0 | 549 | |
| SQA008119 | 3D | 5668 | 7047 | 0 | 0 | 1380 | |
| SQA008120 | 5'UTR | 1 | 573 | 1 | 0 | 573 | |
| SQA008121 | CDS | 574 | 7050 | 0 | 0 | 6477 | |
| SQA008122 | VP4/2 | 574 | 1008 | 0 | 0 | 435 | |
| SQA008123 | genome | 1 | 7062 | 1 | 1 | 7062 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA027315 | protease 3C | 1516 | 1698 | 0 | 0 | 183 | |
| SPA027316 | 3D | 1699 | 2158 | 0 | 0 | 460 | |
| SPA027317 | 3B (VPg) | 1495 | 1515 | 0 | 0 | 21 | |
| SPA027318 | 3A (P3-A) | 1418 | 1494 | 0 | 0 | 77 | |
| SPA027319 | 2C (P2-C) | 1096 | 1417 | 0 | 0 | 322 | |
| SPA027320 | 2B (P2-B) | 1001 | 1095 | 0 | 0 | 95 | |
| SPA027321 | 2A (P2-A) | 859 | 1000 | 0 | 0 | 142 | |
| SPA027322 | 1D (VP1) | 573 | 858 | 0 | 0 | 286 | |
| SPA027323 | 1C (VP3) | 335 | 572 | 0 | 0 | 238 | |
| SPA027324 | 1B (VP2) | 70 | 334 | 0 | 0 | 265 | |
| SPA027325 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA027326 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA027327 | CDS | 1 | 2158 | 0 | 0 | 2158 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |