| RVdb StrainID | ANM00095 | GenBank Accession | OM001467.1 |
| Species | RVA | Sequence Length | 7103 nt |
| Serotype | 46 Checked by RVdb | Serotype (GenBank) | 46 |
| Definition | Rhinovirus A46 strain RvA46/USA/2021/YU9LWX, complete genome | GenBank Submission Date | 2022-01-13 |
| Strain Name | RvA46/USA/2021/YU9LWX | Sampling Date | 2021 |
| Sampling Country | USA | Sampling location | Seattle, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 167324 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA008061 | 1A (VP4) | 573 | 779 | 0 | 0 | 207 | |
| SQA008062 | 1B (VP2) | 780 | 1571 | 0 | 0 | 792 | |
| SQA008063 | 1C (VP3) | 1572 | 2285 | 0 | 0 | 714 | |
| SQA008064 | 1D (VP1) | 2286 | 3164 | 0 | 0 | 879 | |
| SQA008065 | 2A (P2-A) | 3165 | 3593 | 0 | 0 | 429 | |
| SQA008066 | 2B (P2-B) | 3594 | 3878 | 0 | 0 | 285 | |
| SQA008067 | 2C (P2-C) | 3879 | 4841 | 0 | 0 | 963 | |
| SQA008068 | 3'UTR | 7068 | 7103 | 0 | 1 | 36 | |
| SQA008069 | 3A (P3-A) | 4842 | 5075 | 0 | 0 | 234 | |
| SQA008070 | 3B (VPg) | 5076 | 5138 | 0 | 0 | 63 | |
| SQA008071 | protease 3C | 5139 | 5687 | 0 | 0 | 549 | |
| SQA008072 | 3D | 5688 | 7064 | 0 | 0 | 1377 | |
| SQA008073 | 5'UTR | 1 | 572 | 1 | 0 | 572 | |
| SQA008074 | CDS | 573 | 7067 | 0 | 0 | 6495 | |
| SQA008075 | VP4/2 | 573 | 1007 | 0 | 0 | 435 | |
| SQA008076 | genome | 1 | 7103 | 1 | 1 | 7103 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA027510 | protease 3C | 1523 | 1705 | 0 | 0 | 183 | |
| SPA027511 | 3D | 1706 | 2164 | 0 | 0 | 459 | |
| SPA027512 | 3B (VPg) | 1502 | 1522 | 0 | 0 | 21 | |
| SPA027513 | 3A (P3-A) | 1424 | 1501 | 0 | 0 | 78 | |
| SPA027514 | 2C (P2-C) | 1103 | 1423 | 0 | 0 | 321 | |
| SPA027515 | 2B (P2-B) | 1008 | 1102 | 0 | 0 | 95 | |
| SPA027516 | 2A (P2-A) | 865 | 1007 | 0 | 0 | 143 | |
| SPA027517 | 1D (VP1) | 572 | 864 | 0 | 0 | 293 | |
| SPA027518 | 1C (VP3) | 334 | 571 | 0 | 0 | 238 | |
| SPA027519 | 1B (VP2) | 70 | 333 | 0 | 0 | 264 | |
| SPA027520 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA027521 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA027522 | CDS | 1 | 2164 | 0 | 0 | 2164 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |