| RVdb StrainID | ANM00075 | GenBank Accession | ON311220.1 |
| Species | RVA | Sequence Length | 7072 nt |
| Serotype | 25 Checked by RVdb | Serotype (GenBank) | 25 |
| Definition | Rhinovirus A25 strain A25_3 polyprotein gene, complete cds | GenBank Submission Date | 2022-07-19 |
| Strain Name | A25_3 | Sampling Date | 2020-11-30 |
| Sampling Country | USA | Sampling location | King County, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 185898 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA007999 | 1A (VP4) | 565 | 771 | 0 | 0 | 207 | |
| SQA008000 | 1B (VP2) | 772 | 1569 | 0 | 0 | 798 | |
| SQA008001 | 1C (VP3) | 1570 | 2283 | 0 | 0 | 714 | |
| SQA008002 | 1D (VP1) | 2284 | 3129 | 0 | 0 | 846 | |
| SQA008003 | 2A (P2-A) | 3130 | 3555 | 0 | 0 | 426 | |
| SQA008004 | 2B (P2-B) | 3556 | 3840 | 0 | 0 | 285 | |
| SQA008005 | 2C (P2-C) | 3841 | 4806 | 0 | 0 | 966 | |
| SQA008006 | 3'UTR | 7033 | 7072 | 0 | 1 | 40 | |
| SQA008007 | 3A (P3-A) | 4807 | 5037 | 0 | 0 | 231 | |
| SQA008008 | 3B (VPg) | 5038 | 5100 | 0 | 0 | 63 | |
| SQA008009 | protease 3C | 5101 | 5649 | 0 | 0 | 549 | |
| SQA008010 | 3D | 5650 | 7029 | 0 | 0 | 1380 | |
| SQA008011 | 5'UTR | 1 | 564 | 1 | 0 | 564 | |
| SQA008012 | CDS | 565 | 7032 | 0 | 0 | 6468 | |
| SQA008013 | VP4/2 | 565 | 999 | 0 | 0 | 435 | |
| SQA008014 | genome | 1 | 7072 | 1 | 1 | 7072 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA029656 | protease 3C | 1513 | 1695 | 0 | 0 | 183 | |
| SPA029657 | 3D | 1696 | 2151 | 0 | 0 | 456 | |
| SPA029658 | 3B (VPg) | 1492 | 1512 | 0 | 0 | 21 | |
| SPA029659 | 3A (P3-A) | 1415 | 1491 | 0 | 0 | 77 | |
| SPA029660 | 2C (P2-C) | 1093 | 1414 | 0 | 0 | 322 | |
| SPA029661 | 2B (P2-B) | 998 | 1092 | 0 | 0 | 95 | |
| SPA029662 | 2A (P2-A) | 856 | 997 | 0 | 0 | 142 | |
| SPA029663 | 1D (VP1) | 574 | 855 | 0 | 0 | 282 | |
| SPA029664 | 1C (VP3) | 336 | 573 | 0 | 0 | 238 | |
| SPA029665 | 1B (VP2) | 70 | 335 | 0 | 0 | 266 | |
| SPA029666 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA029667 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA029668 | CDS | 1 | 2155 | 0 | 0 | 2155 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |