| RVdb StrainID | ANC08344 | GenBank Accession | DQ473491.1 |
| Species | RVA | Sequence Length | 7145 nt |
| Serotype | 41 Checked by RVdb | Serotype (GenBank) | 41 |
| Definition | Rhinovirus A41, complete genome | GenBank Submission Date | 2022-01-24 |
| Strain Name | -N/A- | Sampling Date | -N/A- |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 185909 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA007247 | 1A (VP4) | 616 | 822 | 0 | 0 | 207 | |
| SQA007248 | 1B (VP2) | 823 | 1611 | 0 | 0 | 789 | |
| SQA007249 | 1C (VP3) | 1612 | 2325 | 0 | 0 | 714 | |
| SQA007250 | 1D (VP1) | 2326 | 3198 | 0 | 0 | 873 | |
| SQA007251 | 2A (P2-A) | 3199 | 3624 | 0 | 0 | 426 | |
| SQA007252 | 2B (P2-B) | 3625 | 3909 | 0 | 0 | 285 | |
| SQA007253 | 2C (P2-C) | 3910 | 4875 | 0 | 0 | 966 | |
| SQA007254 | 3'UTR | 7102 | 7145 | 0 | 0 | 44 | |
| SQA007255 | 3A (P3-A) | 4876 | 5106 | 0 | 0 | 231 | |
| SQA007256 | 3B (VPg) | 5107 | 5169 | 0 | 0 | 63 | |
| SQA007257 | protease 3C | 5170 | 5718 | 0 | 0 | 549 | |
| SQA007258 | 3D | 5719 | 7098 | 0 | 0 | 1380 | |
| SQA007259 | 5'UTR | 1 | 615 | 0 | 0 | 615 | |
| SQA007260 | CDS | 616 | 7101 | 0 | 0 | 6486 | |
| SQA007261 | VP4/2 | 616 | 1050 | 0 | 0 | 435 | |
| SQA007262 | genome | 1 | 7145 | 0 | 0 | 7145 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA000529 | protease 3C | 1519 | 1701 | 0 | 0 | 183 | |
| SPA000530 | 3D | 1702 | 2161 | 0 | 0 | 460 | |
| SPA000531 | 3B (VPg) | 1498 | 1518 | 0 | 0 | 21 | |
| SPA000532 | 3A (P3-A) | 1421 | 1497 | 0 | 0 | 77 | |
| SPA000533 | 2C (P2-C) | 1099 | 1420 | 0 | 0 | 322 | |
| SPA000534 | 2B (P2-B) | 1004 | 1098 | 0 | 0 | 95 | |
| SPA000535 | 2A (P2-A) | 862 | 1003 | 0 | 0 | 142 | |
| SPA000536 | 1D (VP1) | 571 | 861 | 0 | 0 | 291 | |
| SPA000537 | 1C (VP3) | 333 | 570 | 0 | 0 | 238 | |
| SPA000538 | 1B (VP2) | 70 | 332 | 0 | 0 | 263 | |
| SPA000539 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA000540 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA000541 | CDS | 1 | 2161 | 0 | 0 | 2161 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 17477878 | Genome-wide diversity and selective pressure in the human rhinovirus. | 2007 | Virol J | View More |