| RVdb StrainID | ANC08329 | GenBank Accession | DQ473506.1 |
| Species | RVA | Sequence Length | 7149 nt |
| Serotype | 46 Checked by RVdb | Serotype (GenBank) | 46 |
| Definition | Rhinovirus A46, complete genome | GenBank Submission Date | 2022-01-24 |
| Strain Name | -N/A- | Sampling Date | -N/A- |
| Sampling Country | USA | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 167324 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA007199 | 1A (VP4) | 613 | 819 | 0 | 0 | 207 | |
| SQA007200 | 1B (VP2) | 820 | 1611 | 0 | 0 | 792 | |
| SQA007201 | 1C (VP3) | 1612 | 2325 | 0 | 0 | 714 | |
| SQA007202 | 1D (VP1) | 2326 | 3204 | 0 | 0 | 879 | |
| SQA007203 | 2A (P2-A) | 3205 | 3633 | 0 | 0 | 429 | |
| SQA007204 | 2B (P2-B) | 3634 | 3918 | 0 | 0 | 285 | |
| SQA007205 | 2C (P2-C) | 3919 | 4881 | 0 | 0 | 963 | |
| SQA007206 | 3'UTR | 7108 | 7149 | 0 | 0 | 42 | |
| SQA007207 | 3A (P3-A) | 4882 | 5115 | 0 | 0 | 234 | |
| SQA007208 | 3B (VPg) | 5116 | 5178 | 0 | 0 | 63 | |
| SQA007209 | protease 3C | 5179 | 5727 | 0 | 0 | 549 | |
| SQA007210 | 3D | 5728 | 7104 | 0 | 0 | 1377 | |
| SQA007211 | 5'UTR | 1 | 612 | 0 | 0 | 612 | |
| SQA007212 | CDS | 613 | 7107 | 0 | 0 | 6495 | |
| SQA007213 | VP4/2 | 613 | 1047 | 0 | 0 | 435 | |
| SQA007214 | genome | 1 | 7149 | 0 | 0 | 7149 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA000724 | protease 3C | 1523 | 1705 | 0 | 0 | 183 | |
| SPA000725 | 3D | 1706 | 2164 | 0 | 0 | 459 | |
| SPA000726 | 3B (VPg) | 1502 | 1522 | 0 | 0 | 21 | |
| SPA000727 | 3A (P3-A) | 1424 | 1501 | 0 | 0 | 78 | |
| SPA000728 | 2C (P2-C) | 1103 | 1423 | 0 | 0 | 321 | |
| SPA000729 | 2B (P2-B) | 1008 | 1102 | 0 | 0 | 95 | |
| SPA000730 | 2A (P2-A) | 865 | 1007 | 0 | 0 | 143 | |
| SPA000731 | 1D (VP1) | 572 | 864 | 0 | 0 | 293 | |
| SPA000732 | 1C (VP3) | 334 | 571 | 0 | 0 | 238 | |
| SPA000733 | 1B (VP2) | 70 | 333 | 0 | 0 | 264 | |
| SPA000734 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA000735 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA000736 | CDS | 1 | 2164 | 0 | 0 | 2164 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 17477878 | Genome-wide diversity and selective pressure in the human rhinovirus. | 2007 | Virol J | View More |