| RVdb StrainID | ANC08319 | GenBank Accession | EF173415.1 |
| Species | RVA | Sequence Length | 7124 nt |
| Serotype | 12 Checked by RVdb | Serotype (GenBank) | 12 |
| Definition | Human rhinovirus 12, complete genome | GenBank Submission Date | 2007-07-15 |
| Strain Name | -N/A- | Sampling Date | -N/A- |
| Sampling Country | Switzerland | Sampling location | -N/A- |
| Isolation Source | -N/A- | NCBI Taxon ID | 147684 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA007167 | 1A (VP4) | 614 | 820 | 0 | 0 | 207 | |
| SQA007168 | 1B (VP2) | 821 | 1609 | 0 | 0 | 789 | |
| SQA007169 | 1C (VP3) | 1610 | 2323 | 0 | 0 | 714 | |
| SQA007170 | 1D (VP1) | 2324 | 3184 | 0 | 0 | 861 | |
| SQA007171 | 2A (P2-A) | 3185 | 3613 | 0 | 0 | 429 | |
| SQA007172 | 2B (P2-B) | 3614 | 3898 | 0 | 0 | 285 | |
| SQA007173 | 2C (P2-C) | 3899 | 4858 | 0 | 0 | 960 | |
| SQA007174 | 3'UTR | 7082 | 7124 | 0 | 0 | 43 | |
| SQA007175 | 3A (P3-A) | 4859 | 5089 | 0 | 0 | 231 | |
| SQA007176 | 3B (VPg) | 5090 | 5152 | 0 | 0 | 63 | |
| SQA007177 | protease 3C | 5153 | 5701 | 0 | 0 | 549 | |
| SQA007178 | 3D | 5702 | 7078 | 0 | 0 | 1377 | |
| SQA007179 | 5'UTR | 1 | 613 | 0 | 0 | 613 | |
| SQA007180 | CDS | 614 | 7081 | 0 | 0 | 6468 | |
| SQA007181 | VP4/2 | 614 | 1048 | 0 | 0 | 435 | |
| SQA007182 | genome | 1 | 7124 | 0 | 0 | 7124 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA000853 | protease 3C | 1514 | 1696 | 0 | 0 | 183 | |
| SPA000854 | 3D | 1697 | 2153 | 0 | 0 | 457 | |
| SPA000855 | 3B (VPg) | 1493 | 1513 | 0 | 0 | 21 | |
| SPA000856 | 3A (P3-A) | 1416 | 1492 | 0 | 0 | 77 | |
| SPA000857 | 2C (P2-C) | 1096 | 1415 | 0 | 0 | 320 | |
| SPA000858 | 2B (P2-B) | 1001 | 1095 | 0 | 0 | 95 | |
| SPA000859 | 2A (P2-A) | 858 | 1000 | 0 | 0 | 143 | |
| SPA000860 | 1D (VP1) | 571 | 857 | 0 | 0 | 287 | |
| SPA000861 | 1C (VP3) | 333 | 570 | 0 | 0 | 238 | |
| SPA000862 | 1B (VP2) | 70 | 332 | 0 | 0 | 263 | |
| SPA000863 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA000864 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA000865 | CDS | 1 | 2155 | 0 | 0 | 2155 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 17623054 | New complete genome sequences of human rhinoviruses shed light on their phylogeny and genomic features. | 2007 | BMC Genomics | View More |