RVdb StrainID | ANC05089 | GenBank Accession | KR059994.1 |
Species | RVA | Sequence Length | 423 nt |
Serotype | 45 | Serotype (GenBank) | 45 |
Definition | Rhinovirus A isolate KENHRV006 polyprotein gene, partial cds | GenBank Submission Date | 2016-05-12 |
Strain Name | KENHRV006 | Sampling Date | 2008-08-04 |
Sampling Country | Kenya | Sampling location | Nairobi |
Isolation Source | nasopharyngeal | NCBI Taxon ID | 147711 |
Sequencing Technology | Sanger dideoxy sequencing | Assembly Method | DNAbaser v. version 4.0 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SQA005153 | 1A (VP4) | 85 | 291 | 0 | 0 | 207 | |
SQA005154 | 5'UTR | 1 | 84 | 1 | 0 | 84 | |
SQA005155 | CDS | 85 | 423 | 0 | 1 | 339 | |
SQA005156 | VP4/2 | 85 | 423 | 0 | 1 | 339 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SPA008289 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
SPA008290 | VP4/2 | 1 | 113 | 0 | 1 | 113 | |
SPA008291 | CDS | 1 | 113 | 0 | 0 | 113 |
PMID | Title | Publication Year | Journal | View in RVdb |
---|---|---|---|---|
26822469 | Serotype and genetic diversity of human rhinovirus strains that circulated in Kenya in 2008. | 2016 | Influenza Other Respir Viruses | View More |