RVdb StrainID | ANC05084 | GenBank Accession | KR059999.1 |
Species | RVA | Sequence Length | 408 nt |
Serotype | 58 | Serotype (GenBank) | 58 |
Definition | Rhinovirus A isolate KENHRV013 polyprotein gene, partial cds | GenBank Submission Date | 2016-05-12 |
Strain Name | KENHRV013 | Sampling Date | 2008-05-26 |
Sampling Country | Kenya | Sampling location | Nairobi |
Isolation Source | nasopharyngeal | NCBI Taxon ID | 147711 |
Sequencing Technology | Sanger dideoxy sequencing | Assembly Method | DNAbaser v. version 4.0 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SQA005149 | 1A (VP4) | 10 | 216 | 0 | 0 | 207 | |
SQA005150 | 5'UTR | 1 | 9 | 1 | 0 | 9 | |
SQA005151 | CDS | 10 | 408 | 0 | 1 | 399 | |
SQA005152 | VP4/2 | 10 | 408 | 0 | 1 | 399 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SPA008304 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
SPA008305 | VP4/2 | 1 | 133 | 0 | 1 | 133 | |
SPA008306 | CDS | 1 | 133 | 0 | 0 | 133 |
PMID | Title | Publication Year | Journal | View in RVdb |
---|---|---|---|---|
26822469 | Serotype and genetic diversity of human rhinovirus strains that circulated in Kenya in 2008. | 2016 | Influenza Other Respir Viruses | View More |