RVdb StrainID | ANC03564 | GenBank Accession | MH459592.1 |
Species | RVA | Sequence Length | 405 nt |
Serotype | -N/A- | Serotype (GenBank) | -N/A- |
Definition | Rhinovirus A isolate KEN/3090/Aug-2016 polyprotein gene, partial cds | GenBank Submission Date | 2018-11-03 |
Strain Name | KEN/3090/Aug-2016 | Sampling Date | 2016-08-01 |
Sampling Country | Kenya | Sampling location | Kilifi |
Isolation Source | -N/A- | NCBI Taxon ID | 147711 |
Sequencing Technology | Sanger dideoxy sequencing | Assembly Method | Sequencher v. v.5.0 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SQA004268 | 1A (VP4) | 1 | 207 | 0 | 0 | 207 | |
SQA004269 | CDS | 1 | 405 | 0 | 1 | 405 | |
SQA004270 | VP4/2 | 1 | 405 | 0 | 1 | 405 |
SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
---|---|---|---|---|---|---|---|
SPA013138 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
SPA013139 | CDS | 1 | 135 | 0 | 0 | 135 | |
SPA013140 | VP4/2 | 1 | 135 | 0 | 1 | 135 |
PMID | Title | Publication Year | Journal | View in RVdb |
---|---|---|---|---|
30483602 | Human rhinovirus spatial-temporal epidemiology in rural coastal Kenya, 2015-2016, observed through outpatient surveillance. | 2018 | Wellcome Open Res | View More |