RVdb StrainID ANC00184 GenBank Accession OM001355.1
Species RVA Sequence Length 7110 nt
Serotype 61  Checked by RVdb Serotype (GenBank) 61
Definition Rhinovirus A61 strain RvA61/USA/2021/2EX6MN, complete genome GenBank Submission Date 2022-01-13
Strain Name RvA61/USA/2021/2EX6MN Sampling Date 2021
Sampling Country USA Sampling location Seattle, Washington
Isolation Source -N/A- NCBI Taxon ID 185920
Sequencing Technology -N/A- Assembly Method -N/A-

Download selected NT sequences
SeqID Gene Name Start End StartTruncated EndTruncated Length
SQA000555 1A (VP4) 619 825 0 0 207
SQA000556 1B (VP2) 826 1608 0 0 783
SQA000557 1C (VP3) 1609 2322 0 0 714
SQA000558 1D (VP1) 2323 3198 0 0 876
SQA000559 2A (P2-A) 3199 3624 0 0 426
SQA000560 2B (P2-B) 3625 3909 0 0 285
SQA000561 2C (P2-C) 3910 4882 0 0 973
SQA000562 3A (P3-A) 4883 5106 0 0 224
SQA000563 3B (VPg) 5107 5169 0 0 63
SQA000564 protease 3C 5170 5718 0 0 549
SQA000565 3D 5719 7098 0 0 1380
SQA000566 5'UTR 1 618 0 0 618
SQA000567 CDS 619 7101 0 0 6483
SQA000568 VP4/2 619 1053 0 0 435
SQA000569 genome 1 7110 0 1 7110
Download selected AA sequences
SeqID Gene Name Start End StartTruncated EndTruncated Length
SPA026353 protease 3C 1518 1700 0 0 183
SPA026354 3D 1701 2160 0 0 460
SPA026355 3B (VPg) 1497 1517 0 0 21
SPA026356 3A (P3-A) 1420 1496 0 0 77
SPA026357 2C (P2-C) 1098 1419 0 0 322
SPA026358 2B (P2-B) 1003 1097 0 0 95
SPA026359 2A (P2-A) 861 1002 0 0 142
SPA026360 1D (VP1) 569 860 0 0 292
SPA026361 1C (VP3) 331 568 0 0 238
SPA026362 1B (VP2) 70 330 0 0 261
SPA026363 1A (VP4) 1 69 0 0 69
SPA026364 VP4/2 1 145 0 0 145
SPA026365 CDS 1 2160 0 0 2160
PMID Title Publication Year Journal View in RVdb
35749582 The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. 2022 J Infect Dis View More