| RVdb StrainID | ANC00144 | GenBank Accession | OM001400.1 |
| Species | RVA | Sequence Length | 7062 nt |
| Serotype | 47 Checked by RVdb | Serotype (GenBank) | 47 |
| Definition | Rhinovirus A47 strain RvA47/USA/2021/6A42AC, complete genome | GenBank Submission Date | 2022-01-13 |
| Strain Name | RvA47/USA/2021/6A42AC | Sampling Date | 2021 |
| Sampling Country | USA | Sampling location | Seattle, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 185911 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA000428 | 1A (VP4) | 573 | 779 | 0 | 0 | 207 | |
| SQA000429 | 1B (VP2) | 780 | 1574 | 0 | 0 | 795 | |
| SQA000430 | 1C (VP3) | 1575 | 2288 | 0 | 0 | 714 | |
| SQA000431 | 1D (VP1) | 2289 | 3146 | 0 | 0 | 858 | |
| SQA000432 | 2A (P2-A) | 3147 | 3572 | 0 | 0 | 426 | |
| SQA000433 | 2B (P2-B) | 3573 | 3857 | 0 | 0 | 285 | |
| SQA000434 | 2C (P2-C) | 3858 | 4823 | 0 | 0 | 966 | |
| SQA000435 | 3A (P3-A) | 4824 | 5054 | 0 | 0 | 231 | |
| SQA000436 | 3B (VPg) | 5055 | 5117 | 0 | 0 | 63 | |
| SQA000437 | protease 3C | 5118 | 5666 | 0 | 0 | 549 | |
| SQA000438 | 3D | 5667 | 7046 | 0 | 0 | 1380 | |
| SQA000439 | 5'UTR | 1 | 572 | 1 | 0 | 572 | |
| SQA000440 | CDS | 573 | 7049 | 0 | 0 | 6477 | |
| SQA000441 | VP4/2 | 573 | 1007 | 0 | 0 | 435 | |
| SQA000442 | genome | 1 | 7062 | 1 | 1 | 7062 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA026873 | protease 3C | 1516 | 1698 | 0 | 0 | 183 | |
| SPA026874 | 3D | 1699 | 2158 | 0 | 0 | 460 | |
| SPA026875 | 3B (VPg) | 1495 | 1515 | 0 | 0 | 21 | |
| SPA026876 | 3A (P3-A) | 1418 | 1494 | 0 | 0 | 77 | |
| SPA026877 | 2C (P2-C) | 1096 | 1417 | 0 | 0 | 322 | |
| SPA026878 | 2B (P2-B) | 1001 | 1095 | 0 | 0 | 95 | |
| SPA026879 | 2A (P2-A) | 859 | 1000 | 0 | 0 | 142 | |
| SPA026880 | 1D (VP1) | 573 | 858 | 0 | 0 | 286 | |
| SPA026881 | 1C (VP3) | 335 | 572 | 0 | 0 | 238 | |
| SPA026882 | 1B (VP2) | 70 | 334 | 0 | 0 | 265 | |
| SPA026883 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA026884 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA026885 | CDS | 1 | 2158 | 0 | 0 | 2158 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |