| RVdb StrainID | ANC00079 | GenBank Accession | ON311216.1 |
| Species | RVA | Sequence Length | 6975 nt |
| Serotype | 63 Checked by RVdb | Serotype (GenBank) | 63 |
| Definition | Rhinovirus A63 strain A63_1 polyprotein gene, complete cds | GenBank Submission Date | 2022-07-19 |
| Strain Name | A63_1 | Sampling Date | 2020-02-14 |
| Sampling Country | USA | Sampling location | King County, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 185921 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA000224 | 1A (VP4) | 465 | 671 | 0 | 0 | 207 | |
| SQA000225 | 1B (VP2) | 672 | 1466 | 0 | 0 | 795 | |
| SQA000226 | 1C (VP3) | 1467 | 2162 | 0 | 0 | 696 | |
| SQA000227 | 1D (VP1) | 2163 | 3038 | 0 | 0 | 876 | |
| SQA000228 | 2A (P2-A) | 3039 | 3464 | 0 | 0 | 426 | |
| SQA000229 | 2B (P2-B) | 3465 | 3749 | 0 | 0 | 285 | |
| SQA000230 | 2C (P2-C) | 3750 | 4715 | 0 | 0 | 966 | |
| SQA000231 | 3A (P3-A) | 4716 | 4946 | 0 | 0 | 231 | |
| SQA000232 | 3B (VPg) | 4947 | 5009 | 0 | 0 | 63 | |
| SQA000233 | protease 3C | 5010 | 5558 | 0 | 0 | 549 | |
| SQA000234 | 3D | 5559 | 6938 | 0 | 0 | 1380 | |
| SQA000235 | 5'UTR | 1 | 464 | 1 | 0 | 464 | |
| SQA000236 | CDS | 465 | 6941 | 0 | 0 | 6477 | |
| SQA000237 | VP4/2 | 465 | 899 | 0 | 0 | 435 | |
| SQA000238 | genome | 1 | 6975 | 1 | 1 | 6975 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA029605 | protease 3C | 1516 | 1698 | 0 | 0 | 183 | |
| SPA029606 | 3D | 1699 | 2154 | 0 | 0 | 456 | |
| SPA029607 | 3B (VPg) | 1495 | 1515 | 0 | 0 | 21 | |
| SPA029608 | 3A (P3-A) | 1418 | 1494 | 0 | 0 | 77 | |
| SPA029609 | 2C (P2-C) | 1096 | 1417 | 0 | 0 | 322 | |
| SPA029610 | 2B (P2-B) | 1001 | 1095 | 0 | 0 | 95 | |
| SPA029611 | 2A (P2-A) | 859 | 1000 | 0 | 0 | 142 | |
| SPA029612 | 1D (VP1) | 573 | 858 | 0 | 0 | 286 | |
| SPA029613 | 1C (VP3) | 335 | 572 | 0 | 0 | 238 | |
| SPA029614 | 1B (VP2) | 70 | 334 | 0 | 0 | 265 | |
| SPA029615 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA029616 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA029617 | CDS | 1 | 2158 | 0 | 0 | 2158 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |