| RVdb StrainID | ANC00049 | GenBank Accession | ON311246.1 |
| Species | RVA | Sequence Length | 7007 nt |
| Serotype | 23 Checked by RVdb | Serotype (GenBank) | 23 |
| Definition | Rhinovirus A23 strain A23_8 polyprotein gene, complete cds | GenBank Submission Date | 2022-07-19 |
| Strain Name | A23_8 | Sampling Date | 2020-08-17 |
| Sampling Country | USA | Sampling location | King County, Washington |
| Isolation Source | -N/A- | NCBI Taxon ID | 12135 |
| Sequencing Technology | -N/A- | Assembly Method | -N/A- |
Download selected NT sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SQA000128 | 1A (VP4) | 523 | 729 | 0 | 0 | 207 | |
| SQA000129 | 1B (VP2) | 730 | 1512 | 0 | 0 | 783 | |
| SQA000130 | 1C (VP3) | 1513 | 2220 | 0 | 0 | 708 | |
| SQA000131 | 1D (VP1) | 2221 | 3069 | 0 | 0 | 849 | |
| SQA000132 | 2A (P2-A) | 3070 | 3495 | 0 | 0 | 426 | |
| SQA000133 | 2B (P2-B) | 3496 | 3780 | 0 | 0 | 285 | |
| SQA000134 | 2C (P2-C) | 3781 | 4753 | 0 | 0 | 973 | |
| SQA000135 | 3'UTR | 6973 | 7007 | 0 | 1 | 35 | |
| SQA000136 | 3A (P3-A) | 4754 | 4977 | 0 | 0 | 224 | |
| SQA000137 | 3B (VPg) | 4978 | 5040 | 0 | 0 | 63 | |
| SQA000138 | protease 3C | 5041 | 5589 | 0 | 0 | 549 | |
| SQA000139 | 3D | 5590 | 6969 | 0 | 0 | 1380 | |
| SQA000140 | 5'UTR | 1 | 522 | 1 | 0 | 522 | |
| SQA000141 | CDS | 523 | 6972 | 0 | 0 | 6450 | |
| SQA000142 | VP4/2 | 523 | 957 | 0 | 0 | 435 | |
| SQA000143 | genome | 1 | 7007 | 1 | 1 | 7007 |
Download selected AA sequences
| SeqID | Gene Name | Start | End | StartTruncated | EndTruncated | Length | |
|---|---|---|---|---|---|---|---|
| SPA029994 | protease 3C | 1507 | 1689 | 0 | 0 | 183 | |
| SPA029995 | 3D | 1690 | 2145 | 0 | 0 | 456 | |
| SPA029996 | 3B (VPg) | 1486 | 1506 | 0 | 0 | 21 | |
| SPA029997 | 3A (P3-A) | 1409 | 1485 | 0 | 0 | 77 | |
| SPA029998 | 2C (P2-C) | 1087 | 1408 | 0 | 0 | 322 | |
| SPA029999 | 2B (P2-B) | 992 | 1086 | 0 | 0 | 95 | |
| SPA030000 | 2A (P2-A) | 850 | 991 | 0 | 0 | 142 | |
| SPA030001 | 1D (VP1) | 567 | 849 | 0 | 0 | 283 | |
| SPA030002 | 1C (VP3) | 331 | 566 | 0 | 0 | 236 | |
| SPA030003 | 1B (VP2) | 70 | 330 | 0 | 0 | 261 | |
| SPA030004 | 1A (VP4) | 1 | 69 | 0 | 0 | 69 | |
| SPA030005 | VP4/2 | 1 | 145 | 0 | 0 | 145 | |
| SPA030006 | CDS | 1 | 2149 | 0 | 0 | 2149 |
| PMID | Title | Publication Year | Journal | View in RVdb |
|---|---|---|---|---|
| 35749582 | The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters-King County, Washington. | 2022 | J Infect Dis | View More |