Title | Human respiratory viruses, including SARS-CoV-2, circulating in the winter season 2019-2020 in Parma, Northern Italy. | ||
Author | Calderaro, Adriana; De Conto, Flora; Buttrini, Mirko; Piccolo, Giovanna; Montecchini, Sara; Maccari, Clara; Martinelli, Monica; Di Maio, Alan; Ferraglia, Francesca; Pinardi, Federica; Montagna, Paolo; Arcangeletti, Maria Cristina; Chezzi, Carlo | ||
Journal | Int J Infect Dis | Publication Year/Month | 2021-Jan |
PMID | 33017694 | PMCID | PMC7530558 |
Affiliation + expend | 1.Department of Medicine and Surgery, University of Parma, Viale A. Gramsci 14, 43126 Parma, Italy. Electronic address: adriana.calderaro@unipr.it. |
OBJECTIVES: The aim of this study was to determine the prevalence of respiratory virus infections, including severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), during the winter period December 2019 to March 2020, via a tertiary care hospital-based survey in Parma, Northern Italy. METHODS: A total of 906 biological samples from the respiratory tract were analysed by both conventional assays (including culture) and molecular assays targeting nucleic acids of SARS-CoV-2 and other respiratory viruses. RESULTS: Overall, 474 samples (52.3%) were positive for at least one virus, with a total of 583 viruses detected. Single infections were detected in 380 (80.2%) samples and mixed infections were detected in 94 (19.8%). Respiratory syncytial virus (138/583, 23.7%) and rhinovirus (130/583, 22.3%) were the most commonly identified viruses, followed by SARS-CoV-2 (82/583, 14.1%). Respiratory syncytial virus predominated until February, with 129 detections; it then decreased drastically in March to only nine detections. SARS-CoV-2 was absent in the study area until February 26, 2020 and then reached 82 detections in just over a month. SARS-CoV-2 was found in mixed infections in only three cases, all observed in children younger than 1 year old. CONCLUSIONS: This study showed a completely different trend between SARS-CoV-2 and the \'common\' respiratory viruses: the common viruses mostly affected children, without any distinction according to sex, while SARS-CoV-2 mostly affected adult males.