Title Severity of rhinovirus infection in hospitalized adults is unrelated to genotype.
Author McCulloch, Denise J; Sears, Marti H; Jacob, Jesse T; Lyon, G Marshall; Burd, Eileen M; Caliendo, Angela M; Hill, Charles E; Nix, W Allan; Oberste, M Steven; Kraft, Colleen S
Journal Am J Clin Pathol Publication Year/Month 2014-Aug
PMID 25015856 PMCID PMC4332627
Affiliation + expend 1.From the Emory University School of Medicine.

OBJECTIVES: To determine whether rhinovirus (RV) species is associated with more severe clinical illness in adults. METHODS: Seventy-two RV-positive viral respiratory samples from adult patients were sequenced and analyzed phylogenetically after reverse transcriptase polymerase chain reaction of the region spanning the VP4 gene and 5\' terminus of the VP2 gene. The clinical features and severity of illness associated with the different RV species were compared. RESULTS: Phylogenetic analysis identified three distinct clusters as RV-A (54%), B (11%), or C (35%) species. In an unadjusted model, patients with RV-B infection were significantly more likely to have the composite outcome variable of death or intensive care unit admission (P=.03), but this effect diminished when controlling for patient sex. A logistic model of the relationship between RV species and adverse outcomes produced nonsignificant odds ratios when controlling for patient sex. CONCLUSIONS: Infection with RV-A or RV-B was associated with greater severity of illness in our adult population; however, the association disappeared after controlling for confounders.

StrainID RV Species Serotype Length(nt) Country Year Strain Name
UNS03543 Unclassified None 349 USA 2009 CK01
UNS03544 Unclassified None 349 USA 2009 CK03
UNS03545 Unclassified None 343 USA 2009 CK04
UNS03546 Unclassified None 343 USA 2009 CK05
UNS03547 Unclassified None 343 USA 2009 CK06
UNS03548 Unclassified None 349 USA 2009 CK07
UNS03549 Unclassified None 349 USA 2009 CK08
UNS03550 Unclassified None 343 USA 2009 CK100
UNS03551 Unclassified None 349 USA 2009 CK10
UNS03552 Unclassified None 349 USA 2009 CK101
UNS03553 Unclassified None 349 USA 2009 CK102
UNS03554 Unclassified None 349 USA 2009 CK11
UNS03555 Unclassified None 349 USA 2009 CK12
UNS03556 Unclassified None 343 USA 2009 CK14
UNS03557 Unclassified None 349 USA 2009 CK15
UNS03558 Unclassified None 349 USA 2009 CK16
UNS03559 Unclassified None 349 USA 2009 CK17
UNS03560 Unclassified None 349 USA 2009 CK18
UNS03561 Unclassified None 349 USA 2009 CK19
UNS03562 Unclassified None 343 USA 2009 CK20
UNS03563 Unclassified None 349 USA 2009 CK25
UNS03564 Unclassified None 295 USA 2009 CK29
UNS03565 Unclassified None 349 USA 2009 CK55
UNS03566 Unclassified None 349 USA 2009 CK32
UNS03567 Unclassified None 349 USA 2009 CK33
UNS03568 Unclassified None 349 USA 2009 CK34
UNS03569 Unclassified None 349 USA 2009 CK36
UNS03570 Unclassified None 343 USA 2009 CK37
UNS03571 Unclassified None 343 USA 2009 CK38
UNS03572 Unclassified None 349 USA 2009 CK40
UNS03573 Unclassified None 349 USA 2009 CK41
UNS03574 Unclassified None 349 USA 2009 CK42
UNS03575 Unclassified None 349 USA 2009 CK43
UNS03576 Unclassified None 349 USA 2009 CK44
UNS03577 Unclassified None 343 USA 2009 CK47
UNS03578 Unclassified None 349 USA 2009 CK49
UNS03579 Unclassified None 349 USA 2009 CK52
UNS03580 Unclassified None 349 USA 2009 CK53
UNS03581 Unclassified None 349 USA 2009 CK54
UNS03582 Unclassified None 343 USA 2009 CK56
UNS03583 Unclassified None 349 USA 2009 CK57
UNS03584 Unclassified None 343 USA 2009 CK58
UNS03585 Unclassified None 343 USA 2009 CK59
UNS03586 Unclassified None 343 USA 2009 CK60
UNS03587 Unclassified None 343 USA 2009 CK61
UNS03588 Unclassified None 343 USA 2009 CK62
UNS03589 Unclassified None 349 USA 2009 CK63
UNS03590 Unclassified None 349 USA 2009 CK64
UNS03591 Unclassified None 349 USA 2009 CK65
UNS03592 Unclassified None 326 USA 2009 CK66
UNS03593 Unclassified None 349 USA 2009 CK67
UNS03594 Unclassified None 346 USA 2009 CK68
UNS03595 Unclassified None 349 USA 2009 CK69
UNS03596 Unclassified None 349 USA 2009 CK73
UNS03597 Unclassified None 349 USA 2009 CK74
UNS03598 Unclassified None 349 USA 2009 CK76
UNS03599 Unclassified None 346 USA 2009 CK77
UNS03600 Unclassified None 343 USA 2009 CK78
UNS03601 Unclassified None 343 USA 2009 CK79
UNS03602 Unclassified None 349 USA 2009 CK82
UNS03603 Unclassified None 349 USA 2009 CK83
UNS03604 Unclassified None 343 USA 2009 CK84
UNS03605 Unclassified None 343 USA 2009 CK86
UNS03606 Unclassified None 343 USA 2009 CK87
UNS03607 Unclassified None 343 USA 2009 CK89
UNS03608 Unclassified None 343 USA 2009 CK90
UNS03609 Unclassified None 349 USA 2009 CK91
UNS03610 Unclassified None 349 USA 2009 CK93
UNS03611 Unclassified None 349 USA 2009 CK94
UNS03612 Unclassified None 349 USA 2009 CK95
UNS03613 Unclassified None 349 USA 2009 CK96
UNS03614 Unclassified None 343 USA 2009 CK97
UNS03615 Unclassified None 343 USA 2009 CK99
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