Title | Human rhinovirus species and season of infection determine illness severity. | ||
Author | Lee, Wai-Ming; Lemanske, Robert F Jr; Evans, Michael D; Vang, Fue; Pappas, Tressa; Gangnon, Ronald; Jackson, Daniel J; Gern, James E | ||
Journal | Am J Respir Crit Care Med | Publication Year/Month | 2012-Nov |
PMID | 22923659 | PMCID | PMC3530215 |
Affiliation | 1.Biological Mimetics Inc., 124 Byte Drive, Frederick, MD 21702, USA. wlee5hkg@gmail.com. |
RATIONALE: Human rhinoviruses (HRVs) consist of approximately 160 types that cause a wide range of clinical outcomes, including asymptomatic infections, common colds, and severe lower respiratory illnesses. OBJECTIVES: To identify factors that influence the severity of HRV illnesses. METHODS: HRV species and types were determined in 1,445 nasal lavages that were prospectively collected from 209 infants participating in a birth cohort who had at least one HRV infection. Questionnaires were used during each illness to identify moderate to severe illnesses (MSI). MEASUREMENTS AND MAIN RESULTS: Altogether, 670 HRV infections were identified, and 519 of them were solitary infections (only one HRV type). These 519 viruses belonged to 93 different types of three species: 49 A, 9 B, and 35 C types. HRV-A (odds ratio, 8.2) and HRV-C (odds ratio, 7.6) were more likely to cause MSI compared with HRV-B. In addition, HRV infections were 5- to 10-fold more likely to cause MSI in the winter months (P < 0.0001) compared with summer, in contrast to peak seasonal prevalence in spring and fall. When significant differences in host susceptibility to MSI (P = 0.004) were considered, strain-specific rates of HRV MSI ranged from less than 1% to more than 20%. CONCLUSIONS: Factors related to HRV species and type, season, and host susceptibility determine the risk of more severe HRV illness in infancy. These findings suggest that anti-HRV strategies should focus on HRV-A and -C species and identify the need for additional studies to determine mechanisms for seasonal increases of HRV severity, independent of viral prevalence, in cold weather months.
StrainID | RV Species | Serotype | Length(nt) | Country | Year | Strain Name |
---|---|---|---|---|---|---|
UNS03367 | Unclassified | None | 288 | USA | 1998 | W5 |
UNS03368 | Unclassified | None | 286 | USA | 1998 | W14 |
UNS03369 | Unclassified | None | 290 | USA | 1998 | W19 |
UNS03370 | Unclassified | None | 286 | USA | 1998 | W22 |
UNS03371 | Unclassified | None | 290 | USA | 1998 | W27 |
UNS03372 | Unclassified | None | 288 | USA | 1998 | W34 |
UNS03373 | Unclassified | None | 291 | USA | 1998 | W39 |
UNS03374 | Unclassified | None | 283 | USA | 1998 | W40 |
UNS03375 | Unclassified | None | 287 | USA | 1998 | W41 |
UNS03376 | Unclassified | None | 286 | USA | 1998 | W42 |
UNS03377 | Unclassified | None | 288 | USA | 1998 | W45 |
UNS03378 | Unclassified | None | 289 | USA | 1998 | W47 |
UNS03379 | Unclassified | None | 283 | USA | 1998 | W48 |
UNS03380 | Unclassified | None | 284 | USA | 1998 | W49 |
UNS03381 | Unclassified | None | 288 | USA | 1998 | W50 |
UNS03382 | Unclassified | None | 285 | USA | 1998 | W51 |
UNS03383 | Unclassified | None | 287 | USA | 1998 | W52 |
UNS03384 | Unclassified | None | 420 | USA | 1998 | W1 |
UNS03385 | Unclassified | None | 420 | USA | 1998 | W2 |
UNS03386 | Unclassified | None | 420 | USA | 1998 | W3 |
UNS03387 | Unclassified | None | 420 | USA | 1998 | W4 |
UNS03388 | Unclassified | None | 420 | USA | 1998 | W5 |
UNS03389 | Unclassified | None | 420 | USA | 1998 | W6 |
UNS03390 | Unclassified | None | 420 | USA | 1998 | W7 |
UNS03391 | Unclassified | None | 420 | USA | 1998 | W8 |
UNS03392 | Unclassified | None | 420 | USA | 1998 | W9 |
UNS03393 | Unclassified | None | 420 | USA | 1998 | W10 |
UNS03394 | Unclassified | None | 420 | USA | 1998 | W11 |
UNS03395 | Unclassified | None | 420 | USA | 1998 | W12 |
UNS03396 | Unclassified | None | 420 | USA | 1998 | W13 |
UNS03397 | Unclassified | None | 420 | USA | 1998 | W15 |
UNS03398 | Unclassified | None | 420 | USA | 1998 | W16 |
UNS03399 | Unclassified | None | 420 | USA | 1998 | W17 |
UNS03400 | Unclassified | None | 420 | USA | 1998 | W18 |
UNS03401 | Unclassified | None | 420 | USA | 1998 | W19 |
UNS03402 | Unclassified | None | 420 | USA | 1998 | W20 |
UNS03403 | Unclassified | None | 420 | USA | 1998 | W21 |
UNS03404 | Unclassified | None | 420 | USA | 1998 | W22 |
UNS03405 | Unclassified | None | 420 | USA | 1998 | W23 |
UNS03406 | Unclassified | None | 420 | USA | 1998 | W24 |
UNS03407 | Unclassified | None | 420 | USA | 1998 | W25 |
UNS03408 | Unclassified | None | 420 | USA | 1998 | W26 |
UNS03409 | Unclassified | None | 420 | USA | 1998 | W27 |
UNS03410 | Unclassified | None | 420 | USA | 1998 | W28 |
UNS03411 | Unclassified | None | 420 | USA | 1998 | W29 |
UNS03412 | Unclassified | None | 420 | USA | 1998 | W30 |
UNS03413 | Unclassified | None | 420 | USA | 1998 | W31 |
UNS03414 | Unclassified | None | 420 | USA | 1998 | W32 |
UNS03415 | Unclassified | None | 420 | USA | 1998 | W33 |
UNS03416 | Unclassified | None | 420 | USA | 1998 | W34 |
UNS03417 | Unclassified | None | 420 | USA | 1998 | W35 |
UNS03418 | Unclassified | None | 420 | USA | 1998 | W36 |
UNS03419 | Unclassified | None | 420 | USA | 1998 | W37 |
UNS03420 | Unclassified | None | 420 | USA | 1998 | W38 |
UNS03421 | Unclassified | None | 420 | USA | 1998 | W39 |
UNS03422 | Unclassified | None | 420 | USA | 1998 | W40 |
UNS03423 | Unclassified | None | 420 | USA | 1998 | W41 |
UNS03424 | Unclassified | None | 420 | USA | 1998 | W42 |
UNS03425 | Unclassified | None | 420 | USA | 1998 | W43 |
UNS03426 | Unclassified | None | 420 | USA | 1998 | W44 |
UNS03427 | Unclassified | None | 420 | USA | 1998 | W45 |
UNS03428 | Unclassified | None | 420 | USA | 1998 | W46 |
UNS03429 | Unclassified | None | 420 | USA | 1998 | W47 |
UNS03430 | Unclassified | None | 420 | USA | 1998 | W48 |
UNS03431 | Unclassified | None | 420 | USA | 1998 | W49 |
UNS03432 | Unclassified | None | 420 | USA | 1998 | W50 |
UNS03433 | Unclassified | None | 420 | USA | 1998 | W51 |
UNS03434 | Unclassified | None | 420 | USA | 1998 | W52 |