Title | Clinical and molecular epidemiology of human rhinovirus C in children and adults in Hong Kong reveals a possible distinct human rhinovirus C subgroup. | ||
Author | Lau, Susanna K P; Yip, Cyril C Y; Lin, Ada W C; Lee, Rodney A; So, Lok-Yee; Lau, Yu-Lung; Chan, Kwok-Hung; Woo, Patrick C Y; Yuen, Kwok-Yung | ||
Journal | J Infect Dis | Publication Year/Month | 2009-Oct |
PMID | 19708791 | PMCID | PMC7199882 |
Affiliation | 1.State Key Laboratory of Emerging Infectious Diseases, The University of Hong Kong, Hong Kong. pcywoo@hkucc.hku.hk. |
BACKGROUND: A novel human rhinovirus (HRV) species, HRV-C, was recently discovered, but its clinical features and epidemiology, compared with HRV-A and HRV-B, remains poorly understood, especially in adults. METHODS: One thousand two hundred nasopharyngeal aspirate samples obtained from hospitalized children and adults during a 1-year period were subject to reverse-transcriptase polymerase chain reaction to detect HRV. The clinical and molecular epidemiology of the 3 HRV species was analyzed. RESULTS: HRVs were detected in 178 (29.7%) of 600 nasopharyngeal aspirate samples from children and 42 (7%) of 600 nasopharyngeal aspirate samples from adults. HRV-A was most prevalent (n=11), followed by HRV-C (n=91) and HRV-B (n=18). Although upper respiratory tract infection was the most common presentation in children, 8 (62%) of the 13 adults with HRV-C infection had pneumonia, compared with 6 (27%) of the 22 adults with HRV-A infection (P<.05). Wheezing episodes were also more common among individuals with HRV-C (37%) and HRV-A (20%) infection than among those with HRV-B (0%) infection (P<.05). Clinical and molecular data analysis revealed HRV-C as a frequent cause of community and institutionalized outbreaks. A diverse set of HRV-C genotypes was circulating throughout the year, among which a potential distinct subgroup of strains was observed. CONCLUSION: HRV-C is associated with pneumonia in adults and outbreaks of respiratory infections requiring hospitalization. A potential novel HRV-C subgroup was identified.
StrainID | RV Species | Serotype | Length(nt) | Country | Year | Strain Name |
---|---|---|---|---|---|---|
CNC05769 | C | None | 201 | China | 2005 | 126 |
CNC05774 | C | None | 201 | China | 2005 | 121 |
CNC05779 | C | None | 201 | China | 2005 | 115 |
CNC05784 | C | None | 201 | China | 2005 | 110 |
CNC05789 | C | None | 201 | China | 2005 | 104 |
CNC05794 | C | None | 201 | China | 2004 | 99 |
CNC05799 | C | None | 201 | China | 2004 | 94 |
CNC05804 | C | None | 201 | China | 2004 | 89 |
CNC05809 | C | None | 201 | China | 2004 | 83 |
CNC05814 | C | None | 201 | China | 2004 | 77 |
CNC05819 | C | None | 201 | China | 2004 | 69 |
CNC05824 | C | None | 201 | China | 2004 | 64 |
CNC05829 | C | None | 201 | China | 2004 | 59 |
CNC05834 | C | None | 201 | China | 2004 | 54 |
CNC05839 | C | None | 201 | China | 2004 | 49 |
CNC05844 | C | None | 201 | China | 2004 | 42 |
CNC05849 | C | None | 201 | China | 2004 | 35 |
CNC05854 | C | None | 201 | China | 2004 | 30 |
CNM05770 | C | None | 201 | China | 2005 | 125 |
CNM05775 | C | None | 201 | China | 2005 | 120 |
CNM05780 | C | None | 201 | China | 2005 | 114 |
CNM05785 | C | None | 201 | China | 2005 | 109 |
CNM05790 | C | None | 201 | China | 2005 | 103 |
CNM05795 | C | None | 201 | China | 2004 | 98 |
CNM05800 | C | None | 201 | China | 2004 | 93 |
CNM05805 | C | None | 201 | China | 2004 | 88 |
CNM05810 | C | None | 201 | China | 2004 | 82 |
CNM05815 | C | None | 201 | China | 2004 | 76 |
CNM05820 | C | None | 201 | China | 2004 | 68 |
CNM05825 | C | None | 201 | China | 2004 | 63 |
CNM05830 | C | None | 201 | China | 2004 | 58 |
CNM05835 | C | None | 201 | China | 2004 | 53 |
CNM05840 | C | None | 201 | China | 2004 | 46 |
CNM05845 | C | None | 201 | China | 2004 | 39 |
CNM05850 | C | None | 201 | China | 2004 | 34 |
CNM05855 | C | None | 201 | China | 2004 | 29 |
CNP05767 | C | None | 201 | China | 2005 | 128 |
CNP05772 | C | None | 201 | China | 2005 | 123 |
CNP05777 | C | None | 201 | China | 2005 | 118 |
CNP05782 | C | None | 201 | China | 2005 | 112 |
CNP05787 | C | None | 201 | China | 2005 | 106 |
CNP05792 | C | None | 201 | China | 2004 | 101 |
CNP05797 | C | None | 201 | China | 2004 | 96 |
CNP05802 | C | None | 201 | China | 2004 | 91 |
CNP05807 | C | None | 201 | China | 2004 | 86 |
CNP05812 | C | None | 201 | China | 2004 | 79 |
CNP05817 | C | None | 201 | China | 2004 | 74 |
CNP05822 | C | None | 201 | China | 2004 | 66 |
CNP05827 | C | None | 201 | China | 2004 | 61 |
CNP05832 | C | None | 201 | China | 2004 | 56 |
CNP05837 | C | None | 201 | China | 2004 | 51 |
CNP05842 | C | None | 201 | China | 2004 | 44 |
CNP05847 | C | None | 201 | China | 2004 | 37 |
CNP05852 | C | None | 201 | China | 2004 | 32 |
CNP05857 | C | None | 201 | China | 2004 | 27 |
CNS05768 | C | None | 201 | China | 2005 | 127 |
CNS05773 | C | None | 201 | China | 2005 | 122 |
CNS05778 | C | None | 201 | China | 2005 | 117 |
CNS05783 | C | None | 201 | China | 2005 | 111 |
CNS05788 | C | None | 201 | China | 2005 | 105 |
CNS05793 | C | None | 201 | China | 2004 | 100 |
CNS05798 | C | None | 201 | China | 2004 | 95 |
CNS05803 | C | None | 201 | China | 2004 | 90 |
CNS05808 | C | None | 201 | China | 2004 | 85 |
CNS05813 | C | None | 201 | China | 2004 | 78 |
CNS05818 | C | None | 201 | China | 2004 | 72 |
CNS05823 | C | None | 201 | China | 2004 | 65 |
CNS05828 | C | None | 201 | China | 2004 | 60 |
CNS05833 | C | None | 201 | China | 2004 | 55 |
CNS05838 | C | None | 201 | China | 2004 | 50 |
CNS05843 | C | None | 201 | China | 2004 | 43 |
CNS05848 | C | None | 201 | China | 2004 | 36 |
CNS05853 | C | None | 201 | China | 2004 | 31 |
CNZ05771 | C | None | 201 | China | 2005 | 124 |
CNZ05776 | C | None | 201 | China | 2005 | 119 |
CNZ05781 | C | None | 201 | China | 2005 | 113 |
CNZ05786 | C | None | 201 | China | 2005 | 107 |
CNZ05791 | C | None | 201 | China | 2005 | 102 |
CNZ05796 | C | None | 201 | China | 2004 | 97 |
CNZ05801 | C | None | 201 | China | 2004 | 92 |
CNZ05806 | C | None | 201 | China | 2004 | 87 |
CNZ05811 | C | None | 201 | China | 2004 | 81 |
CNZ05816 | C | None | 201 | China | 2004 | 75 |
CNZ05821 | C | None | 201 | China | 2004 | 67 |
CNZ05826 | C | None | 201 | China | 2004 | 62 |
CNZ05831 | C | None | 201 | China | 2004 | 57 |
CNZ05836 | C | None | 201 | China | 2004 | 52 |
CNZ05841 | C | None | 201 | China | 2004 | 45 |
CNZ05846 | C | None | 201 | China | 2004 | 38 |
CNZ05851 | C | None | 201 | China | 2004 | 33 |
CNZ05856 | C | None | 201 | China | 2004 | 28 |