Title Clinical and molecular epidemiology of human rhinovirus C in children and adults in Hong Kong reveals a possible distinct human rhinovirus C subgroup.
Author Lau, Susanna K P; Yip, Cyril C Y; Lin, Ada W C; Lee, Rodney A; So, Lok-Yee; Lau, Yu-Lung; Chan, Kwok-Hung; Woo, Patrick C Y; Yuen, Kwok-Yung
Journal J Infect Dis Publication Year/Month 2009-Oct
PMID 19708791 PMCID PMC7199882
Affiliation 1.State Key Laboratory of Emerging Infectious Diseases, The University of Hong Kong, Hong Kong. pcywoo@hkucc.hku.hk.

BACKGROUND: A novel human rhinovirus (HRV) species, HRV-C, was recently discovered, but its clinical features and epidemiology, compared with HRV-A and HRV-B, remains poorly understood, especially in adults. METHODS: One thousand two hundred nasopharyngeal aspirate samples obtained from hospitalized children and adults during a 1-year period were subject to reverse-transcriptase polymerase chain reaction to detect HRV. The clinical and molecular epidemiology of the 3 HRV species was analyzed. RESULTS: HRVs were detected in 178 (29.7%) of 600 nasopharyngeal aspirate samples from children and 42 (7%) of 600 nasopharyngeal aspirate samples from adults. HRV-A was most prevalent (n=11), followed by HRV-C (n=91) and HRV-B (n=18). Although upper respiratory tract infection was the most common presentation in children, 8 (62%) of the 13 adults with HRV-C infection had pneumonia, compared with 6 (27%) of the 22 adults with HRV-A infection (P<.05). Wheezing episodes were also more common among individuals with HRV-C (37%) and HRV-A (20%) infection than among those with HRV-B (0%) infection (P<.05). Clinical and molecular data analysis revealed HRV-C as a frequent cause of community and institutionalized outbreaks. A diverse set of HRV-C genotypes was circulating throughout the year, among which a potential distinct subgroup of strains was observed. CONCLUSION: HRV-C is associated with pneumonia in adults and outbreaks of respiratory infections requiring hospitalization. A potential novel HRV-C subgroup was identified.

StrainID RV Species Serotype Length(nt) Country Year Strain Name
CNC05769 C None 201 China 2005 126
CNC05774 C None 201 China 2005 121
CNC05779 C None 201 China 2005 115
CNC05784 C None 201 China 2005 110
CNC05789 C None 201 China 2005 104
CNC05794 C None 201 China 2004 99
CNC05799 C None 201 China 2004 94
CNC05804 C None 201 China 2004 89
CNC05809 C None 201 China 2004 83
CNC05814 C None 201 China 2004 77
CNC05819 C None 201 China 2004 69
CNC05824 C None 201 China 2004 64
CNC05829 C None 201 China 2004 59
CNC05834 C None 201 China 2004 54
CNC05839 C None 201 China 2004 49
CNC05844 C None 201 China 2004 42
CNC05849 C None 201 China 2004 35
CNC05854 C None 201 China 2004 30
CNM05770 C None 201 China 2005 125
CNM05775 C None 201 China 2005 120
CNM05780 C None 201 China 2005 114
CNM05785 C None 201 China 2005 109
CNM05790 C None 201 China 2005 103
CNM05795 C None 201 China 2004 98
CNM05800 C None 201 China 2004 93
CNM05805 C None 201 China 2004 88
CNM05810 C None 201 China 2004 82
CNM05815 C None 201 China 2004 76
CNM05820 C None 201 China 2004 68
CNM05825 C None 201 China 2004 63
CNM05830 C None 201 China 2004 58
CNM05835 C None 201 China 2004 53
CNM05840 C None 201 China 2004 46
CNM05845 C None 201 China 2004 39
CNM05850 C None 201 China 2004 34
CNM05855 C None 201 China 2004 29
CNP05767 C None 201 China 2005 128
CNP05772 C None 201 China 2005 123
CNP05777 C None 201 China 2005 118
CNP05782 C None 201 China 2005 112
CNP05787 C None 201 China 2005 106
CNP05792 C None 201 China 2004 101
CNP05797 C None 201 China 2004 96
CNP05802 C None 201 China 2004 91
CNP05807 C None 201 China 2004 86
CNP05812 C None 201 China 2004 79
CNP05817 C None 201 China 2004 74
CNP05822 C None 201 China 2004 66
CNP05827 C None 201 China 2004 61
CNP05832 C None 201 China 2004 56
CNP05837 C None 201 China 2004 51
CNP05842 C None 201 China 2004 44
CNP05847 C None 201 China 2004 37
CNP05852 C None 201 China 2004 32
CNP05857 C None 201 China 2004 27
CNS05768 C None 201 China 2005 127
CNS05773 C None 201 China 2005 122
CNS05778 C None 201 China 2005 117
CNS05783 C None 201 China 2005 111
CNS05788 C None 201 China 2005 105
CNS05793 C None 201 China 2004 100
CNS05798 C None 201 China 2004 95
CNS05803 C None 201 China 2004 90
CNS05808 C None 201 China 2004 85
CNS05813 C None 201 China 2004 78
CNS05818 C None 201 China 2004 72
CNS05823 C None 201 China 2004 65
CNS05828 C None 201 China 2004 60
CNS05833 C None 201 China 2004 55
CNS05838 C None 201 China 2004 50
CNS05843 C None 201 China 2004 43
CNS05848 C None 201 China 2004 36
CNS05853 C None 201 China 2004 31
CNZ05771 C None 201 China 2005 124
CNZ05776 C None 201 China 2005 119
CNZ05781 C None 201 China 2005 113
CNZ05786 C None 201 China 2005 107
CNZ05791 C None 201 China 2005 102
CNZ05796 C None 201 China 2004 97
CNZ05801 C None 201 China 2004 92
CNZ05806 C None 201 China 2004 87
CNZ05811 C None 201 China 2004 81
CNZ05816 C None 201 China 2004 75
CNZ05821 C None 201 China 2004 67
CNZ05826 C None 201 China 2004 62
CNZ05831 C None 201 China 2004 57
CNZ05836 C None 201 China 2004 52
CNZ05841 C None 201 China 2004 45
CNZ05846 C None 201 China 2004 38
CNZ05851 C None 201 China 2004 33
CNZ05856 C None 201 China 2004 28
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