Data Browse
RVdb integrates high quality virus strain data, nucleotide sequence, protein sequence, 3D protein structure and literature related to RV. Click here to browse.
RV is a single-stranded, positive-sense RNA virus belonging to the family Picornavirus, genus Enterovirus. The RNA genome is approximately 7.2 kb in length and...
Multiple Sequence Alignment
Users can perform multiple sequence alignments through RVdb and visualize the alignment results.
Phylogenetic Tree Construction
RVdb can perform automatic multiple sequence alignment, pruning of alignment results, automatic optimization and selection of model parameters, and generate a phylogenetic tree that can be beautified online.
RV Sequence Annotation
This function enables faster and more accurate structural annotation of RV nucleic acid sequences.
VP1-based RV Typing
The pipeline can achieve the most accurate RV typing automation, and present the result report.
RVdb BLAST (basic local alignment search tool)
A RVdb BLAST search enables researchers to compare a subject protein or nucleotide sequence (called a query) with RVdb sequences, and identify database sequences that resemble alphabet above a certain threshold.
Real-Time Tracking of Rhinovirus Evolution
This function present a real-time view into the evolution and spread of RV.The accuracy of the predictive results provided by this feature relies on factors such as data quality, sampling biases, and model compatibility. It is intended exclusively for researchers to offer theoretical insights and research directions, and should not be utilized directly for public health decision-making.
Other Resources
Publications and Our Related Works
| Zhao P, Zhou SY, Xu PP, et al. RVdb: a comprehensive resource and analysis platform for rhinovirus research. Nucleic Acids Research, 2023 |
| Zhao P, Shao N, Dong J, et al. Genetic diversity and characterization of rhinoviruses from Chinese clinical samples with a global perspective. Microbiol Spectr. 2023 |